Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833460.1_cds_XP_016505233.1_18592
CDS Infomation

[gene=LOC107823151] [db_xref=GeneID:107823151] [protein=U-box domain-containing protein 4-like] [protein_id=XP_016505233.1] [location=join(36390..37727,38836..38898)] [gbkey=CDS]
Sequence

ATGGTTTCACTTGAAGAATCTCAGTCTCATTCACATTCTCATAGTGTTAATAGTGTTTCT
AGTACTACCCATTTTGGCCAAACACGGCCTTATTACTACACTCCACCGCCGTTATCTTCC
GCCGCTAAATTCAACCGTTCAATTGGTCGGTCCATGAGAACTATCCGATCATCAACTACT
TTCCGTTCAACTAATTGTTCCGGCTCCGTTTCTGAAAACTCCGGTGCTATTTCCGAGAAT
CTTACCGACTCCGTCATTGATATTCATCTTGGCGAGCTTTCGAGAAAGTCTCAGGCGAAT
AAATCCTCAACTTCCGAAGAGGATTTTCTGGAACTTTCTCAAGCTTTCAGTGATTTCTCA
GCTTGTAGTAGTGATATCTCTGGAGAGTTACAGCGGTTAGCAAGTGTTCCGGTTTCGGAT
CAGGGTAACCCGAATTCTAAACACGAGCCCGAACCGGAACCTTGCTTCGGGTTTCTAGAA
AGAGAGAAATTTTCAACGGAGATAATCGAGAGTATTTCGCCGGAGGATCTTCAACCGACG
GTGAAACTCTGCGTCGACAGCTTAAATTCTCCTTCAGTCGCCGTTAAAAGATCAGCGGCA
GCTAAATTAAGGTTATTAGCGAAGAATCGGGCTGATAATCGGGCTTTAATAGGCGAATCG
GGTGCAATTCCAGTCCTAATCCCACTTCTTCGGTGCACCGACCCGTGGACGCAAGAACAC
GCAGTAACAGCACTGTTAAATCTCTCACTTCACGAACCAAACAAGACCTTAATCACTTCA
TCAGGGGCAATTAAGTCATTAATCTACGTGCTCAAAACCGGGACTGACACGTCGAAACAG
AATGCTGCCTGTGGGCTTTTAAGCTTAGCTTTAGTTGATGAAAATAAGCTTTCAATTGGT
GCTTGTGGTGCTATTCCACCATTAGTGGGACTACTTATAAATGGAACAAATAGAGGAAAA
AAAGATGCTTTAACGACTCTTTATAAGCTTTGTTCAGTGAAATTAAATAAAGAGAGGGCT
ATTGTTGCAGGTGCAGTGAAGCCATTAGTAGGGCTAGTTTGTGAAAATGGGAATGGATTA
GCTGAAAAAGCTATGGTGGTGTTGAGTATATTGGCTGGGATTGAAATGGGAAAAGTGGCT
ATTGTTGAAGAAGGTGGAATTGCTGCACTTGTTGAAGCTATTGAAGATGGTTCTGATAAA
GGAAGGGAATTTGCAGTGTTGACACTTTTGCAACTTTGTGTGGATAGTGTTAGAAACAGA
GGGCTTCTTGTTAGAGAAGGTGGAATTCCTCCTCTTGTTGCCTTGTCTCAAAATGGTACT
GCTAAAGCTAAGCACAAGGCAGAAACTCTACTGGGATACTTGAGAGAACCAAGACAAGAA
GCATCAAGTTCTACCCCTTGA

Peptide Sequence

PEP ID

XP_016505233.1
PEP Infomation

PREDICTED: U-box domain-containing protein 4-like [Nicotiana tabacum]
Sequence

MVSLEESQSHSHSHSVNSVSSTTHFGQTRPYYYTPPPLSSAAKFNRSIGRSMRTIRSSTT
FRSTNCSGSVSENSGAISENLTDSVIDIHLGELSRKSQANKSSTSEEDFLELSQAFSDFS
ACSSDISGELQRLASVPVSDQGNPNSKHEPEPEPCFGFLEREKFSTEIIESISPEDLQPT
VKLCVDSLNSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAIPVLIPLLRCTDPWTQEH
AVTALLNLSLHEPNKTLITSSGAIKSLIYVLKTGTDTSKQNAACGLLSLALVDENKLSIG
ACGAIPPLVGLLINGTNRGKKDALTTLYKLCSVKLNKERAIVAGAVKPLVGLVCENGNGL
AEKAMVVLSILAGIEMGKVAIVEEGGIAALVEAIEDGSDKGREFAVLTLLQLCVDSVRNR
GLLVREGGIPPLVALSQNGTAKAKHKAETLLGYLREPRQEASSSTP

Transcript Sequence

Gene sequence data has not been registered.